XmlmmCIF equivalent: struct_ref_seq
Data items in the STRUCT_REF_SEQ category provide a mechanism
for indicating and annotating a region (or regions) of alignment
between the sequence of an entity or biological unit described
in the data block and the sequence in the referenced database
entry.
XmlmmCIF equivalent: struct_ref_seq/db_align_beg
The sequence position at which the alignment begins in the
referenced database entry.
XmlmmCIF equivalent: struct_ref_seq/db_align_end
The sequence position at which the alignment ends in the
referenced database entry.
XmlmmCIF equivalent: struct_ref_seq/details
A description of special aspects of the sequence alignment.
XmlmmCIF equivalent: struct_ref_seq/pdbx_PDB_id_code
The PDB code of the structure.
XmlmmCIF equivalent: struct_ref_seq/pdbx_auth_seq_align_beg
Initial position in the PDB sequence segment.
XmlmmCIF equivalent: struct_ref_seq/pdbx_auth_seq_align_end
Ending position in the PDB sequence segment
XmlmmCIF equivalent: struct_ref_seq/pdbx_db_accession
Accession code of the reference database.
XmlmmCIF equivalent: struct_ref_seq/pdbx_db_align_beg_ins_code
Initial insertion code of the sequence segment of the
reference database.
XmlmmCIF equivalent: struct_ref_seq/pdbx_db_align_end_ins_code
Ending insertion code of the sequence segment of the
reference database.
XmlmmCIF equivalent: struct_ref_seq/pdbx_seq_align_beg_ins_code
Initial insertion code of the PDB sequence segment.
XmlmmCIF equivalent: struct_ref_seq/pdbx_seq_align_end_ins_code
Ending insertion code of the sequence segment
XmlmmCIF equivalent: struct_ref_seq/pdbx_strand_id
The PDB strand/chain ID .
XmlmmCIF equivalent: struct_ref_seq/ref_id
This data item is a pointer to _struct_ref.id in the
STRUCT_REF category.
XmlmmCIF equivalent: struct_ref_seq/seq_align_beg
The sequence position at which the alignment begins in the
entity or biological unit described in the data block.
This data item is a pointer to _entity_poly_seq.num in the
ENTITY_POLY_SEQ category.
XmlmmCIF equivalent: struct_ref_seq/seq_align_end
The sequence position at which the alignment begins in the
entity or biological unit described in the data block.
This data item is a pointer to _entity_poly_seq.num in the
ENTITY_POLY_SEQ category.
XmlmmCIF equivalent: struct_ref_seq/align_id
The value of _struct_ref_seq.align_id must uniquely identify a
record in the STRUCT_REF_SEQ list.
Note that this item need not be a number; it can be any unique
identifier.